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International Journal for Parasitology

○ Elsevier BV

Preprints posted in the last 30 days, ranked by how well they match International Journal for Parasitology's content profile, based on 26 papers previously published here. The average preprint has a 0.02% match score for this journal, so anything above that is already an above-average fit.

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Efficacy of Repeated-Dose Albendazole/ Mebendazole Regimens for Soil-Transmitted Helminth Infections in Paediatric Population: A Systematic Review and Meta-Analysis

Singh, N.; Sahu, P.; Singh, V.; Bharti, P. P.; Siddiqui, A. M.; Kumar, A.

2026-10-12 pediatrics 10.64898/2026.10.09.26365109 medRxiv
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Background: Preventive chemotherapy via single-dose benzimidazoles remains the core strategy for soil-transmitted helminth (STH) control. However, single-dose regimens often yield sub-optimal clearance against species such as Trichuris trichiura and hookworm. This systematic review and meta-analysis evaluated the comparative efficacy of repeated-dose versus standard single-dose albendazole or mebendazole regimens in paediatric populations. Methods: Registered prospectively on PROSPERO (CRD420261491616), a comprehensive search of PubMed, Embase, Cochrane Library, and Google Scholar identified clinical trials comparing repeated-dose against single-dose albendazole or mebendazole in paediatric STH infections. Primary outcomes were cure rate (CR) and egg reduction rate (ERR). Random-effects models synthesized pooled odds ratios (OR) and mean differences (MD). Risk of bias was assessed using the Cochrane RoB 2 tool. Results: Five randomized clinical trials (N = 1,718 participants) met the inclusion criteria. Overall, repeated dosing demonstrated significant superiority in cure rate (pooled OR = 4.47, 95% CI: 1.58-12.67; I{superscript 2} = 92%) and egg reduction rate (pooled MD = 0.17, 95% CI: 0.01-0.32; I{superscript 2} = 87%). Discussion: Repeated-dose benzimidazole regimens offer superior overall therapeutic efficacy compared to standard single-dose administration in children. However, this therapeutic advantage is drug-specific: multi-dose albendazole consistently enhances parasite clearance across trial settings, whereas multi-dose mebendazole exhibits variable performance and lacks conclusive superiority over single dosing. Conclusion: Transitioning to targeted, multi-dose albendazole protocols--rather than mebendazole--may serve as an effective public health intervention to eliminate residual parasite reservoirs in high-transmission endemic regions.

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The potato cyst nematode Globodera pallida possesses an expanded serotonergic nervous system

Coke, M. C.; Lilley, C. J.; Healey, R.; O'Connor, V. M.; Holden-Dye, L. M.; Urwin, P. E.

2026-10-06 neuroscience 10.64898/2026.09.29.755464 medRxiv
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Abstract The neurotransmitter serotonin (5-hydroxytryptamine; 5-HT) controls behaviours that are essential for the parasitic lifestyle of plant parasitic nematodes (PPNs). Here, we used serotonin immunochemistry and in situ hybridization for the serotonin synthesis genes, Gpa-tph-1 and Gpa-bas-1, to map its signalling pathways in Globodera pallida J2 infective stages. We identified fourteen serotonin-immunoreactive cell bodies around the pharyngeal median bulb and revealed that eleven of them co-express Gpa-tph-1 and Gpa-bas-1, confirming these are serotonin-synthesising neurons. Serotonin immunoreactivity was also localised in structures consistent with labelling of amphids, and in sixteen non-neuronal cells located in the middle and posterior region of the nematode. Depletion of serotonin with reserpine reduced the serotonin immunoreactivity in all fourteen cell bodies confirming their neuronal identity, but not in non-neuronal tissue. We identified additional, but infrequent expression of Gpa-tph-1 in two cells and expression of Gpa-bas-1 in one pair of symmetrically bilateral cells anterior to the median bulb, that lacked serotonin immunoreactivity. The results reveal distinct pools of serotonin distribution in G. pallida and indicate serotonin signalling is more complex than in other parasitic nematodes and C. elegans, highlighting evolutionary divergence in neurotransmitter identity.

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Subclinical hepatorenal biomarker alterations and urogenital indicators in Schistosoma haematobium-infected School-Aged Children in Sene West District, Ghana

Ofori, D. K.; Acheampong, A.; Kudzordzi, P.-C.; Nyarko, P.; Nseide, C. W.; Boateng, E. A.; Tanko, Y. S.; Caffrey, C. R.; Otabil, K. B.

2026-10-02 infectious diseases 10.64898/2026.09.30.26364430 medRxiv
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Urogenital schistosomiasis, caused by Schistosoma haematobium, remains a major public health challenge among school-aged children in rural Ghana. Although urogenital indicators are well-established, systemic hepatic biomarker alterations in post-mass drug administration pediatric settings remain poorly characterized. This cross-sectional study evaluated point-of-care urinalysis profiles alongside a panel of serum hepatic and renal biomarkers in 174 children (aged 3 to 16 years) from the Sene West District, Ghana. Active infection (urine microscopy egg detection) was identified in 84 participants (48.3%, median egg count = 4.50 eggs/10 mL, IQR: 1.00 - 9.25). Active infection was strongly associated with microhematuria (57.1% vs. 11.1%, p < 0.001), proteinuria (42.9% vs. 22.2%, p = 0.004), and leukocyturia (27.4% vs. 4.4%, p < 0.001). Children with active infection also demonstrated a higher frequency of composite categorical hepatic biomarker alterations (60.7% vs. 37.8%, p = 0.002), whereas categorical renal alterations showed no significant difference (p = 0.332). Controlling for age and sex, multivariable logistic regression confirmed active infection as a significant independent predictor of composite hepatic biomarker alterations (aOR = 2.54, 95% CI: 1.37 - 4.69, p = 0.003), but not renal alterations (aOR = 1.40, p = 0.359). Continuous medians for individual serum biomarkers showed no significant differences between groups. Combining composite hepatic biomarker thresholds with routine dipstick screening improves the detection of subclinical morbidity in pediatric field settings.

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Neoehrlichia mikurensis, where art thou? A negative analysis of 87 Swedish wild boars (Sus scrofa)

Lindell, H. M. K.; Jenkins, A.; Evens, K. C.; Dinnetz, P.; Lehtilä, K.

2026-10-04 ecology 10.64898/2026.09.29.755505 medRxiv
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Neoehrlichia mikurensis is widely detected in tick populations across Europe, yet its host range beyond small rodents remains poorly understood. Large wild mammals are frequently exposed to tick vectors, but their role in the transmission cycle of this bacterium is unclear. Wild boars (Sus scrofa) are among the most abundant large mammals in southern Sweden and commonly inhabit tick-infested environments, making them a potentially relevant host species. In this study, spleen samples from 87 wild boars collected between 2023 and 2025 across southern and central Sweden were analysed for the presence of N. mikurensis DNA using quantitative polymerase chain reaction. N. mikurensis DNA was not detected in any of the analysed samples, despite sampling in regions where the bacterium is known to be prevalent in ticks. These results indicate that wild boars may have a limited role in the maintenance of N. mikurensis in Sweden, although the possibility of rare or transient infection cannot be excluded. Despite being based on negative findings, this study contributes to a more comprehensive understanding of the host range of N. mikurensis and highlights the importance of continued evaluation of wildlife species in the transmission dynamics of tick-borne pathogens.

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Comparison of sodium azide- and cooling-based immobilization methods for Caenorhabditis elegans chemotaxis assays

Ji, R.; Wibisono, S.; Sun, J.

2026-10-05 animal behavior and cognition 10.64898/2026.09.28.755163 medRxiv
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Chemotaxis assays are widely used to quantify sensory-driven behavioral responses in Caenorhabditis elegans. Sodium azide is commonly used to immobilize animals at assay endpoints, although concerns have been raised that diffusion beyond the endpoint region could affect behavior before a choice is completed. We compared sodium azide-mediated immobilization with post-assay cooling using the repellent 1-octanol and attractant diacetyl. Wild-type animals showed robust avoidance of 30% 1-octanol and attraction to 0.5% diacetyl with either method, across multiple assay durations, and with or without worm food Escherichia coli OP50. These results support post-assay cooling as an alternative endpoint-scoring method.

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Increased sensitivity of detecting variation in malaria endemicity by parasite density measurement in large surveys

Oyibo, W.; Blair, A. M.; Oladipo, O.; Ogbulafor, N.; Urude, R. O.; Onwuachusi, G.; Anabike, C.; Ntadom, G.; Okoronkwo, C.; Uhomoibhi, P.; Eze, N.; Oresanya, O.; Mahmoud, A.; Okoro, O.; Aduagba, B.; Ijezie, S.; Okoh, F.; Kawu, I.; Ozor, L.; Maikore, I.; Maxwell, K.; Ezeiru, S.; Nwokolo, E.; Amajoh, C.; Audu, M.; Mokuolu, O.; Biyama, Z.; Adeyoju, T.; Obike, N.; Ilelaboye, J.; Lawson, A.; Conway, D. J.

2026-10-08 infectious diseases 10.64898/2026.10.07.26364850 medRxiv
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Introduction: The continuing high and inequitable global malaria burden requires improved methods to understand trends and target control. Current methods often involve infection prevalence surveys, but additional parasitological measures could increase precision in estimating infection burdens of communities. Methods: Focusing on the country with most malaria globally, examinations of slides from 10,651 children under five sampled in the 2021 national Malaria Indicator Survey in Nigeria were performed to measure asexual parasite densities in infected children and discriminate sexual stages and species. Variation in these indices among the six different geopolitical zones and 37 individual states including the Federal Capital Territory were compared with the variation indicated by infection prevalence alone. Results: Among the six major geopolitical zones, only one had significantly higher asexual parasite prevalence than others, but parasite densities within infected children revealed more significant variation among the different zones. Comparing results for 2021 with previous data from 2018, one zone showed lower asexual parasite prevalence and two had lower sexual parasite prevalence, but three had higher asexual parasite densities in infected children. Variation in parasite densities among individual states also highlighted significant geographical and temporal differences, extending the detection of heterogeneity within each geopolitical zone. Overall trends were driven by the predominant parasite species Plasmodium falciparum as prevalence and density of the other species were much lower. Conclusions: Findings indicate that understanding complex patterns of geographical and temporal variation is enhanced by including asexual parasite density measurement, providing opportunities for more precise targeting of malaria control within high burden countries.

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Occurrence, incidence, and severity of Alternaria leaf spot of cotton (Gossypium hirsutum L.) in major cotton-growing districts of the Lake Zone, Tanzania

EUSTACE, S. M. M.; Mwaipopo, B. V.; Madege, R. R.

2026-09-24 plant biology 10.64898/2026.09.24.754005 medRxiv
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Background: Alternaria leaf spot (ALS), caused by fungi in the genus Alternaria (family Pleosporaceae), is a significant fungal disease that affects cotton production in the Lake Zone of Tanzania, the country's main cotton-producing region. The disease reduces photosynthetic capacity, boll retention, and fiber quality, leading to substantial yield losses in affected fields. Despite its increasing prevalence, systematic baseline epidemiological data remain scarce. Objective: This study aimed to determine the occurrence, incidence, and severity of Alternaria leaf spot across the major cotton-growing districts of the Lake Zone, Tanzania. Methods: Field surveys were conducted during the 2024-2025 growing season in the districts of Bariadi, Bunda, Chato, and Magu; 20 representative cotton fields were systematically assessed using a diagonal sampling approach. Disease incidence, prevalence, and severity were recorded for 1,000 cotton plants. Fungal isolates recovered from symptomatic leaves were sent to the laboratory for isolation and morphological identification. Results: Field prevalence was 100%, and the overall mean incidence was 64.4%, with significant inter-district variation: Bariadi (77.6%), Bunda (68.8%), Chato (60.0%), and Magu (52.4%). Mean DSI ranged from 44.0% (Magu) to 70.1% (Bariadi), indicating moderate-to-severe infection. Disease incidence and Disease severity (DSI) were strongly correlated when uninfected plants were included (r = 0.942, P < 0.001). However, this relationship weakened substantially and became non-significant when restricted to infected plants only (r = 0.396, P = 0.084). This suggests that higher incidence reflected more plants becoming infected rather than greater severity among already infected plants. Morphological characterization identified all 40 isolates as belonging to the genus Alternaria. Conclusion: These findings provide the first systematic epidemiological baseline for Alternaria leaf spot across the major cotton-growing districts of Tanzania's Lake Zone. Disease incidence and severity varied significantly across districts, underscoring the need for tailored disease management strategies. This study recommends ongoing surveillance and integrated disease management to safeguard cotton productivity among smallholder farmers in the region.

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Population genetic structure and connectivity of Glossina palpalis gambiensis and G. morsitans submorsitans in Southwestern Senegal

Bakhoum, M. T.; Fall, A. G.; Segard, A.; Seck, M. T.; Thiall, A. S.; Gimonneau, G.; Ravel, S.; DE MEEUS, T.

2026-09-24 ecology 10.64898/2026.09.24.753986 medRxiv
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In sub-Saharan Africa, human and animal health is threatened by African trypanosomoses. These diseases are caused by trypanosomes that are transmitted primarily by tsetse flies. Vector control remains one of the most effective strategies for reducing disease transmission, but requires a minimum level of knowledge of the population biology, ecology and dispersal patterns of the targeted vectors. In this respect, population genetic approaches using appropriate polymorphic genetic markers can provide valuable tools to inform and optimize control strategies. Senegal is currently engaged in a national tsetse control programme and has been identified as a study country within a European Union-funded research initiative, COMBAT (controlling and progressively minimizing the burden of animal trypanosomosis). Baseline entomological studies are currently underway in the Sine Saloum (Southern Senegal). This preliminary study aimed to characterize the population genetic structure and connectivity of tsetse fly species present in Southern Senegal, Glossina palpalis gambiensis and G. morsitans submorsitans, in order to assess their population sizes (geographically and demographically), population densities and dispersal capacities. The two species exhibited markedly contrasting population structures. The first, G. p. gambiensis, displayed an isolation by distance with rather dense subpopulations exchanging immigrants at short distances (1.6 km/generation) and continuously from Sine-Saloum to Casamance, in line with the apparent continuity of the mangrove network found along this coast. In contrast, G. m. submorsitans presented a relatively dense population over a 75 km wide area, fragmented into sparsely distributed, very dense and interconnected pockets. These findings indicate that G. p. gambiensis likely constitutes a large metapopulation comprising 3266 effective individuals on average (and up to 7765), whereas G. m. submorsitans appeared as a single and large population, scattered in small pockets that could be readily replenished by immigrants from distant areas in case of control. These results suggest that elimination is not a realistic option for any of these two populations. Alternatively, localized integrated pest management is likely to be the most effective approach for controlling the negative effects of these biting flies on domestic animals, by reducing trypanosome transmission. However, further entomological investigations and the use of more informative genetic markers are needed to obtain a more precise understanding of the epidemiological processes involved.

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Single-cell transcriptomics reveals life cycle and cell cycle gene expression dynamics during in vitro growth of two Leishmania species

Marques, C. A.; Laidlaw, R. F.; Warren, F.; da Silva, G. L. A.; Young, M.; Crouch, K.; Burchmore, R.; Otto, T. D.; Llewellyn, M.; McCulloch, R.; Briggs, E. M.

2026-09-30 microbiology 10.64898/2026.09.29.755301 medRxiv
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Leishmania species are transmitted between mammals by sand flies, within which they undergo a complex developmental programme involving transitions between replicative and non-replicative life cycle forms. Recent work using single-cell transcriptomics has revealed the developmental pathways of Leishmania major in the sand fly, but it is unclear how faithfully such development is recapitulated during Leishmania culture in vitro. In addition, no work has revealed how gene expression changes across the cell cycle of replicative Leishmania forms. Using single-cell transcriptomics on unsynchronised cultures of L. major and L. mexicana, we addressed both questions. We show that in vitro L. mexicana promastigotes display the same two developmental endpoints seen in L. major cells recovered from sand flies, metacyclics and haptomonads. In contrast, L. major promastigote development in vitro does not predict the presence of leptomonads or haptomonads, although non-dividing late metacyclics form through an early metacyclic stage as parasites enter stationary phase. Using computational reconstruction of the cell cycle in procyclic promastigote forms of both Leishmania species identified hundreds of genes whose transcript levels vary as the cell cycle progresses, revealing core conserved processes between the two species and with the closely related Trypanosoma brucei. These genes allowed us to examine connections between life cycle and cell cycle progression, revealing that some developmental transitions are strongly linked to a cell cycle phase, whereas others occur asynchronously. This work provides a comprehensive atlas and marker gene list for the interlinked cell and life cycles of two laboratory-cultured Leishmania species.

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Diversity of egg parasitoids of stink bugs in France, with emphasis on Scelionidae parasitizing main Pentatomidae pests.

Bout, A.; Warot, S.; Cesari, L.; Hamidi, R.; Caravel, C.; Talamas, E.; Tortorici, F.; Ris, N.

2026-09-28 ecology 10.64898/2026.09.25.754315 medRxiv
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Stink bugs (Hemiptera Pentatomidae) are major agricultural pests worldwide, including both native and invasive species. In France, for instance, Halyomorpha halys has rapidly expanded its range, affecting key crops such as hazelnuts, apples, and vegetables. Meanwhile, several native, polyphagous species - Nezara viridula, Palomena prasina and, to a lesser extent, Graphosoma italicum - are re-emerging and impacting diverse crops because of changes in agricultural practices and climatic conditions. Egg parasitoids represent promising biological control agents for these pests, be it through conservation, augmentation or introduction biological control. However, their actual potential is not precisely documented due to a lack of ambitious surveys and possible taxonomic issues. This study aims to address this gap by compiling results obtained from various of egg parasitism surveys of Pentatomidae in France and implementing a large-scale DNA Barcoding approach (2000 individuals) for the emerged parasitoids. Our results indicate a high diversity of egg parasitoids, and detected some taxonomic issues and molecular inconsistencies that warrant further study. Among the three families of egg parasitoids recovered (Encyrtidae, Eupelmide, and Scelionidae), Scelionidae was the most abundant and diverse with nine species of Trissolcus (including the two adventive species, Tr. japonicus and Tr. mitsukurii) and four Telenomus species (including two unidentified to species). Scelionidae dominated the parasitoid assemblages associated with most of the Pentatomidae host species, except for H. halys for which the eupelmid Anastatus bifasciatus was the most common species.

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Epidemic potential of Maravalia cryptostegiae, a classical biological control agent of rubber vine, in Northeastern Brazil

Del Ponte, E. M.; Costa, R. C.; Barreto, R. W. W.

2026-10-06 plant biology 10.64898/2026.10.05.756685 medRxiv
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Rubber vines (Cryptostegia madagascariensis and C. grandiflora) are highly invasive weeds in the semi-arid landscapes of many tropical regions. The rust fungus Maravalia cryptostegiae has provided a spetatular and sustainable control of invasive C. grandiflora populations in Australia, after its scientific and quarantine-authorized release in the context of a classical biological control program. The Caatinga biome of Northeastern Brazil is under a devastating invasion by C. madagascariensis. This species is also susceptible to M. cryptostegia but its epidemic potential towards C. madagascariensis in Brazil remains unknown. We developed a weather-driven epidemiological model integrating experimentally derived relationships for infection as a function of temperature and wetness duration and for temperature-dependent latent development. Three infection-response models were fitted to 20 experimental temperature x wetness combinations from the literature and compared using information criteria, grouped cross-validation and a parametric bootstrap. The selected model, in which thermal breadth increases with wetness duration, was best supported (R2 = 0.931; {Delta}AICc [&ge;] 3.3 relative to the alternatives), and prolonged wetness significantly broadened the thermal range favorable for infection ({gamma} = 0.30 oC h-1; bootstrap P = 0.002). The infection and latent-development models were coupled with 25 years (2001-2025) of hourly NASA POWER data for 65 grid cells representing rubber-vine-infested locations in Northeastern Brazil, with wetness defined as hours with relative humidity equal or greater than 90%. Infection potential was concentrated in March-June (73% of the annual total, peaking in April), coinciding with the regional rainy season, and was highest in the interior of northern and central Ceara. Predicted potential varied more than a hundredfold among grid cells and was lowest along parts of the Ceara coast and the lower Jaguaribe valley, which include some of the largest infestations; the magnitude of these contrasts depended on the humidity threshold used to define wetness. Applied with identical rules to 13 historical release sites in Queensland, Australia, the model reproduced the documented wet-season timing of rust activity, and predicted potential was on average higher at sites with reported high rust impact, although the difference was not statistically significant. These results indicate strong seasonal and geographic structuring of weather-driven epidemic potential and provide testable hypotheses for selecting release periods and locations for M. cryptostegiae in Brazil.

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Fluffy nests and bloody parasites: feather lining does not mitigate bird blow flies infestations

Coroller-Chouraki, S.; Savage, J.; Pelletier, F.; Garant, D.; Belisle, M.

2026-10-06 ecology 10.64898/2026.10.04.756503 medRxiv
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Feathers incorporated into bird nests are thought to provide multiple benefits, including thermal insulation and protection against nest-dwelling ectoparasites. For instance, in Swallows, it has been suggested that feathers influence infestations by Protocalliphora blow flies either by acting as a physical barrier between larvae and nestlings or through chemical compounds associated with preen oil. However, empirical evidence for an antiparasitic effect of feathers remains equivocal. Using 1,100 naturally infested Tree Swallow (Tachycineta bicolor) nests collected from a nest-box study system monitored in southern Quebec, Canada, between 2004 and 2018, we tested whether nest mass and feather abundance influenced hematophagous ectoparasites (Protocalliphora spp.) loads. We further assessed whether feather abundance directly affected body size using measurements of 1,513 P. sialia puparia, and emergence success using data from 961 Protocalliphora spp. puparia. Nest mass was positively associated with feather abundance, and both variables showed very weak positive relationships with parasite abundance. Feather abundance was unrelated to puparium size nor parasite emergence success. Our results provide no support for an anti-parasitic effect of feather lining within Tree Swallow nests. Using one of the largest datasets assembled to date on feather-lined nests and avian blow flies, we found no evidence that feather abundance impairs Protocalliphora density, development or emergence success. However, our findings do not preclude potential effects of feathers on other ectoparasites or microorganisms with different life histories. Future studies simultaneously monitoring multiple parasite taxa (such as fleas, mites, or bacteria) may therefore be needed to fully evaluate the ecological consequences of feather lining within avian nests.

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Multi-domain analysis of the fecal microbiome of dairy heifers, beef heifers, bred beef heifers, and adult beef cows in the central United States using paired 16S rRNA and 18S rRNA metabarcoding

Palmer, D.; Adkins, P. R. F.; Isensee, P.; Dorfmeyer, R. A.; Su, E.; Turner, G.; Davis, D. J.; Bivens, N. J.; McAdams, Z. L.; Ericsson, A. C.

2026-10-09 systems biology 10.64898/2026.10.08.757609 medRxiv
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The growth and performance of cattle is dependent on efficient feed conversion, facilitated by the gut microbiome, including both prokaryotic and eukaryotic organisms. Extrinsic factors such as management practices and intrinsic factors like age and genetics can shape these communities. To characterize the relative effects of such factors on the prokaryotic and eukaryotic microbiomes, fresh fecal samples from dairy heifers (n = 8), beef heifers (n = 8), bred beef heifers (n = 8), and adult beef cows (n = 8) were subjected to paired 16S rRNA (V4) and a novel 18S rRNA (V4-V5) metabarcoding assay, and 18S rRNA amplicons were annotated using two databases in parallel. Taxonomic resolution of 18S rRNA amplicons was excellent, with SILVA and EUKARYOME databases each providing better resolution of different groups of organisms. While no differences in eukaryotic richness or alpha diversity were detected, beta diversity differed in all pairwise comparisons except between beef heifers and bred beef heifers. Prokaryotic richness was lower in adult beef cows than the other groups, and beta diversity differed in all pairwise comparisons. Adult beef cows were the most distinct, characterized by replacement of fungal organisms with protozoa and loss of thermophilic bacteria in the eukaryotic and prokaryotic compartments, respectively. Among numerous differentially abundant features, dairy heifers harbored greater abundance of Cooperia oncophora while beef heifers contained greater abundance of Buxtonella sulcata and Mucor. Correlation network analysis revealed multiple significant positive and negative associations between bacterial, fungal, and protozoal features during maturation of the fecal microbiome. Collectively, these data highlight the richness and diversity of both the prokaryotic and eukaryotic compartments of the bovine fecal microbiome, and the influence of management practices and age on both communities. From a technical standpoint, these data demonstrate the ability to resolve fungal, protozoal, and metazoan organisms, including potential parasites and pathogens, with a single metabarcoding assay. They also highlight the nuanced differences between databases and the value of parallel analyses using more than one database.

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Community knowledge, chronic morbidity and microfilaraemia following mass drug administration for lymphatic filariasis in northern Ghana: a cross-sectional study

Ngmembong, C. N.; Captain-Esoah, M.; Lareef, S.; Angyiereyiri, E. D.; Donkor, M. N.; Dassah, S. D.; Azameti, M. K.; Motey, G. A.; Adetunde, L. A.; Abalori, T. A.; Frempong, K. K.; Kubio, C.; Asoala, V.; Boakye, D. A.; Dadzie, S. K.; Antwi, F. O.; Adjei, M. R.; Grobusch, M. P.; Bakajika, D.; Lule, F. J.; Juma, E.; Braka, F.; Achu, D.

2026-10-09 infectious diseases 10.64898/2026.10.07.26364534 medRxiv
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Objectives To assess microfilaraemia, chronic lymphatic filariasis (LF)-related morbidity, and community knowledge and self-reported preventive behaviours in a rural community in northern Ghana following prolonged mass drug administration (MDA). Design Community-based cross-sectional study. Setting Birifor community, Lawra Municipality, Upper West Region, northern Ghana, from October 2024 to January 2025. Participants A total of 261 community members aged 10 years and above were selected using random sampling and participated in the study. Outcome measures Outcome measures included microfilaraemia detected by night blood microscopy, chronic LF-related morbidity identified through clinical examination, and community knowledge and self-reported preventive behaviours assessed using a structured questionnaire. Results No microfilariae were detected (0/261; 0%). Chronic lymphoedema was identified in five individuals (1.9%), all aged over 40 years. Awareness of LF was high (95.8%), yet only 39.5% of participants demonstrated good community knowledge and self-reported preventive behaviours. Misconceptions regarding transmission, particularly beliefs that LF is hereditary or caused by spiritual factors, were common. MDA participation was high (93.1%). All five individuals with chronic lymphoedema reported loss of income, and three (60%) reported additional household income loss due to caregiving responsibilities. Conclusions No microfilaraemia was detected, suggesting very low transmission in the study area, although residual infection cannot be excluded. Chronic LF-related morbidity and gaps in community knowledge persist despite high MDA participation. Sustained surveillance using more sensitive diagnostic approaches, together with morbidity management and disability prevention, community education and support for affected households, will be important to sustain LF elimination efforts.

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Large-scale phenotyping and multi-trait selection identify low-methane Napier grass (Cenchrus purpureus) accessions under contrasting environmental conditions

Zeleke, A. W.; Palma-Hidalgo, J.; Dominguez, Z. P.; Muktar, M.; Teshome, A.; Hatew, B.; Jones, C. S.; Newbold, C. J.

2026-09-23 plant biology 10.64898/2026.09.22.753521 medRxiv
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Abstract Napier grass (Cenchrus purpureus, NG) is an important forage in tropical and subtropical livestock systems, but the extent of naturally occurring variation in its methane (CH4) production and its potential for selecting low-CH4 emitting genotypes remains poorly characterised. This study evaluated variation in CH4 yield among NG accessions, examined the effects of season and water stress, validated contrasting CH4 phenotypes across donor cows, and identified elite accessions combining low CH4 yield with favourable digestibility. A total of 750 NG samples representing 84 accessions grown under dry and wet seasons and moderate and severe water-stress were evaluated using a high-throughput in-vitro fermentation system. To further identify forages combining low-CH4 production with acceptable digestibility, a multi-trait selection approach was applied using biologically defined thresholds for CH4 yield and in vitro organic matter digestibility (IVOMD), followed by a weighted index assigning 60% weight to CH4 yield and 40% to IVOMD. Methane yield varied widely among accessions, ranging from 0.02 to 5.07 mL/g DM and was affected by growing conditions. Methane production was generally lower during the wet season, while water stress was associated with changes in forage quality and fermentation characteristics. Low-CH4 producing accessions generally had lower IVOMD, crude protein and metabolizable energy and relatively higher fibre than high-CH4 producing accessions. Accessions initially classified as low and high-CH4 emitters based solely on CH4 yield were subsequently validated using rumen inoculum from three individual donor cows. Although the magnitude of CH4 production varied among donors, the contrast between low- and- high-CH4 accessions was generally retained, supporting the robustness of accession differences in CH4 production. Several accessions also maintained relatively low CH4 production across contrasting season and water-stress conditions, indicating that favourable CH4 phenotypes were not entirely environment dependent. A multi-trait selection identified ten elite accessions that produced 0.019-0.810 mL CH4/g DM and had 55.2-69.0% IVOMD, whereas ten poor-performing accessions produced 2.80-3.89 mL CH4/g DM and had 50.1-54.7% IVOMD. Differences in hexose fermentation and CH4 produced per unit of fermented substrate further indicated contrasting fermentation efficiency between the groups. These results demonstrate substantial variation in NG and identify accessions with low-CH4 production, favourable digestibility and relatively stable performance across growing conditions. In conclusion, incorporating CH4 yield and digestibility into forage selection could support the development of lower-emission forage cultivars for sustainable climate-smart livestock production.

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Mapping county-level tick-borne disease risk in Illinois by integrating vector abundance, pathogen prevalence, and phenology

Hussain, A.; Bhowmick, S.; Mateus-Pinilla, N.; Smith, R. L.

2026-10-16 epidemiology 10.64898/2026.10.14.26365569 medRxiv
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Tick-borne disease risk reflects the combined influence of vector abundance, pathogen prevalence, human exposure, and seasonal activity, yet these components are rarely integrated at the county level. We developed species-specific ecological risk scores for three medically important tick species (Acari: Ixodidae): Amblyomma americanum (L.), Dermacentor variabilis (Say), and Ixodes scapularis Say, across all 102 Illinois counties using data from 2019 to 2022. County-level predicted tick abundance and pathogen prevalence were scaled and combined using equal weights to generate primary vector-level risk scores. Robustness to the equal-weight assumption was evaluated by systematically varying the relative weights assigned to abundance and pathogen prevalence, while a separate sensitivity analysis incorporated reported tick-bite incidence where available. Associations with human disease were evaluated using negative binomial regression of tick-borne disease case counts on the corresponding risk scores, with county population included as an offset. Monthly phenology indicators were constructed by integrating human disease cases, reported tick bites, and sampled tick abundance and were evaluated in relation to temperature and precipitation. Seasonal risk was estimated by combining county-level vector risk with species-specific monthly phenology, generating monthly risk surfaces that were deployed through an interactive R Shiny application. Higher risk scores were significantly associated with greater disease case rates for each tick species. County rankings were highly stable under moderate changes in abundance and prevalence weighting. Seasonal activity differed among species, with A. americanum and D. variabilis showing concentrated warm-season risk and I. scapularis exhibiting a broader seasonal profile. These county-level seasonal risk maps identify where and when relative tick-borne disease risk is elevated in Illinois, supporting targeted prevention, surveillance, and clinical awareness.

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Early mosquito immune patterns correlate with differential Plasmodium falciparum ookinete load

Bevivino, G.; Dipaola, M. G.; Modiano, D.; Arca, B.; Lombardo, F.

2026-09-22 molecular biology 10.64898/2026.09.21.753172 medRxiv
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The innate immune response of Anopheles mosquitoes is closely associated with the successful development of Plasmodium parasites and their subsequent transmission to humans. However, the extent to which mosquito immune activation correlates with parasite burden during early sporogonic development, and how additional factors may be linked to variation in this early immune response, remains only partly understood. In this study, we examined the immune responses of individual Anopheles coluzzii mosquitoes fed on Plasmodium falciparum infected blood with identical gametocytemia, yet exhibiting different infection intensities at the ookinete stage. We focused on the critical window of ookinete maturation and midgut traversal (12 to 36 hours post-infection), a key phase for parasite establishment, while minimizing confounding factors such as mosquito age, microbiota composition, blood meal variability, and experimental noise. Ookinete burden was estimated in individual mosquitoes by quantifying four well established stage-specific transcripts (ctrp, warp, soap, and cht1), allowing stratification into "low" and "high" ookinete load groups prior to RNA-seq analysis. Transcriptional profiling revealed clear differences between these two conditions, with mosquitoes carrying lower ookinete loads exhibiting stronger upregulation of immune-related genes compared to those with higher burdens, indicating that the reduced parasite establishment during the very early stages of infection is strictly associated with an effective immune activation. Notably, genes involved in L-arginine homeostasis were significantly modulated, highlighting a pathway not extensively explored in the context of mosquito anti-Plasmodium defense. Overall, our findings show that ookinete burden correlates with distinct mosquito transcriptional states during early infection and emphasize the value of ookinete-specific transcripts quantification for dissecting early vector-parasite interactions.

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Quantifying Fine-scale Vegetation Associated with Ixodes scapularis Density to Inform Public Health Programming, Western Massachusetts

Tsalah, J. M.; Bobskill, V.; Ravenhurst, J.; Ross, K.; Gardner, A.; Landesman, W.; Lover, A. A.

2026-10-20 epidemiology 10.64898/2026.10.14.26363243 medRxiv
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Vegetation plays a critical role in shaping fine-scale tick density by structuring local microclimates, habitat resources, and host interactions that largely determine tick survival and activity, with implications for tick-borne disease transmission. Tick burden in the United States continues to increase, with annual reported tick-borne disease cases more than doubling from 2004 through 2019. These trends call for a broader scope of tick-mitigation strategies that go beyond traditional prevention measures that focus on personal protection; and there is an opportunity to inform habitat-level interventions. Here, we quantify fine-scale vegetation structure across 48 subplots at tick surveillance sites in Western Massachusetts to assess local habitat features associated with Ixodes scapularis density and potential for human-tick contact risk. In assessing understory and overstory vegetation attributes, this study identified life stage-specific differences in predicted tick density, with higher adult densities in areas with deeper leaf litter and presence of invasive plant species and nymphs associated with high presence of ferns. Both adult and nymphal Ix. scapularis were predicted at higher densities in relatively low basal area forests (18.9 to 26.9 m2/hectare). This study design provides a simple, low-cost framework for organizations looking to incorporate tick-informed forest measurement ecology into their public health tick surveillance protocols with minimal training.

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Genomic and proteomic insights into the virulence of a native Heterorhabditis indica-Photorhabdus akhurstii complex active against Spodoptera spp.

Peralta, C.; Torres-Sanz, N.; Palma, L.

2026-10-11 microbiology 10.64898/2026.10.10.758207 medRxiv
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A native entomopathogenic nematode isolate, Heterorhabditis indica Che4.1, was recovered from soils in Valencia (Spain), and its symbiotic bacterium, Photorhabdus akhurstii Che4.1, was isolated and characterized. Nematode identification was confirmed by ITS and 28S rDNA sequencing, while genome-based analyses supported the taxonomic assignment of the bacterial symbiont. The nematode-bacterium complex exhibited insecticidal activity against Spodoptera exigua and Spodoptera littoralis. H. indica Che4.1 showed an LC of 53.7 infective juveniles (IJs)/mL against S. exigua, comparable to that of the commercial reference Larvanem (54.3 IJs/mL). Against S. littoralis, Che4.1 exhibited an approximately twofold lower LC than Larvanem (77.3 versus 155.9 IJs/mL), with non-overlapping 95% confidence intervals. The complete genome of P. akhurstii Che4.1 consists of a single circular chromosome of 5.66 Mb encoding a diverse repertoire of putative virulence factors, including toxin complex (Tc) components, YenTc-like proteins, Mcf toxins, App-family proteins, Pra/Prb proteins, and chitinases, together with several predicted secondary metabolite biosynthetic gene clusters. LC-MS/MS analyses of bacterial culture supernatants and infected insect cadavers detected multiple predicted virulence-associated proteins, including Tc-related, YenTc-like, App-family, and Pra/Prb proteins. In addition, bacterial cell-free supernatants caused 68.8-81.3% mortality in S. exigua neonates under laboratory conditions. Together, these findings reveal a diverse repertoire of potential virulence determinants in P. akhurstii Che4.1 and demonstrate the insecticidal potential of its native nematodebacterium complex. The performance of H. indica Che4.1 relative to a commercial reference supports further evaluation of this isolate for biological control of Spodoptera spp., particularly under greenhouse and field conditions.

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Scale- and genotype-dependent spatial concordance of Mycobacterium bovis in cattle and badgers

Akhmetova, A.; Salvador, L. C. M.; Oravcova, K.; Presho, E.; McComick, C.; Thompson, S.; Wright, L.; Menzies, F.; Trimble, N.; Harwood, R.; Kao, R. R.; Allen, A.; Pepler, T.; Skuce, R.

2026-10-05 ecology 10.64898/2026.10.01.756065 medRxiv
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Mycobacterium bovis causes tuberculosis (TB) in cattle, badgers (Meles meles), other wildlife, and humans, posing major animal and public health challenges in Britain and Ireland. Shared genotypes between cattle and badgers have been reported at regional scales, but whether this concordance holds at finer spatial scales, where control interventions operate, and whether it varies by genotype combination, remains unknown. Resolving this is critical for interpreting cross-species transmission risk and designing targeted control measures. We analyzed 1,248 M. bovis isolates from cattle and badgers (Northern Ireland, 1986-2018), including samples from a small, densely sampled intervention research area, using Multi-Locus Variable Number of Tandem Repeats Analysis (MLVA) and kernel discriminant analysis (KDA) across multiple spatial scales (25-95% density contours). We identified 36 MLVA types with four shared between species and one (MLV06) endemic to the area. Spatial concordance varied by type combination and scale: MLVA004-MLVA297 showed strong, bidirectional, scale-robust concordance; MLVA006-MLVA297 was concordant only at fine spatial scales; MLVA004-MLVA006 showed weak, asymmetric concordance; and no concordance was detected when all three types were analysed together. Our findings reveal spatial concordance between shared M. bovis genotypes varied by genotype combination and scale, indicating genotype-specific dynamics within this multi-host system.